Datacube

hist_in_mask

Plot elemental map and histogram associated only for a specific element in a mineralcube.

Parameters:

Name	Type	Description	Default
data_cube	DataCube	DataCube to plot.	required
mineral_cube	MineralCube	MineralCube to check if element in mineral.	required
element	str	Name of the wanted element (eg: 'Fe').	required
mineral	str	Name of the wanted mask (eg: 'Galene').	required

Note

Does not work if datacube is HyperCube (yet).

hist

Plot elemental map and histogram of a specific element.

Parameters:

Name	Type	Description	Default
datacube	DataCube	Marcia DataCube Object.	required
indice	str	Element to plot.	required

datacube_hist

Plot the elemental map on the left side an the corresponding hitogram of intensity on the right side Input is the index of the element in the 3D array Useful function in order to set the threshold in the spreadsheet.

Parameters:

Name	Type	Description	Default
datacube	DataCube	Marcia DataCube Object.	required
indice	str	Element to plot.	required

mineralcube_hist

Plot the elemental map on the left side an the corresponding hitogram of probability to be in the mineral on the right side. Input is the index of the element in the 3D array Useful function in order to set the threshold in the spreadsheet.

Parameters:

Name	Type	Description	Default
mineral_cube	MineralCube	Marcia DataCube Object.	required
indice	str	Element to plot.	required

plot

Plot the mineral mask wanted Input is the index of the mineral in the 3D array (cube).

Parameters:

Name	Type	Description	Default
datacube	DataCube	Marcia DataCube Object.	required
indice	str	Element to plot.	required

biplot

Plot one element against another one in a scatter plot Input is the indexes of each of the two element in the 3D array Useful function in order to see elemental ratios and some elemental thresholds.

Parameters:

Name	Type	Description	Default
datacube	DataCube	Marcia DataCube Object.	required
indicex	str	Element to plot on x-axis.	required
indicey	str	Element to plot on y-axis.	required

triplot

Plot one element against another one in a scatter plot Input is the indexes of each of the two element in the 3D array Useful function in order to see elemental ratios and some elemental thresholds.

Parameters:

Name	Type	Description	Default
datacube	DataCube	Marcia DataCube Object.	required
indicex	str	Element to plot on x-axis.	required
indicey	str	Element to plot on y-axis.	required
indicez	str	Element to color data with.	required

plot_minerals

For mineralogy purposes, valid only if all masks are minerals Plot all the mask onto one picture in order to visualize the classification. Each pixel correspond to only one mineral at the time, if not, it is classified as "mixed".

Parameters:

Name	Type	Description	Default
datacube	MineralCube	Marcia MineralCube Object.	required